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1

Inactivation of ku80 in the mushroom-forming fungus Schizophyllum commune increases the relative incidence of homologous recombination

Jan F. De Jong, Robin A. Ohm, Charissa De Bekker, Han A.B. Wösten, Luis G. Lugones

Journal:

FEMS Microbiology Letters

Year:

2010

Language:

english

File:

PDF, 180 KB

english, 2010

2

Comparative genomics provides insights into the lifestyle and reveals functional heterogeneity of dark septate endophytic fungi

Knapp, Dániel G., Németh, Julianna B., Barry, Kerrie, Hainaut, Matthieu, Henrissat, Bernard, Johnson, Jenifer, Kuo, Alan, Lim, Joanne Hui Ping, Lipzen, Anna, Nolan, Matt, Ohm, Robin A., Tamás, László,

Journal:

Scientific Reports

Year:

2018

Language:

english

File:

PDF, 3.47 MB

english, 2018

3

Genomics and development of Lentinus tigrinus , a white-rot wood-decaying mushroom with dimorphic fruiting bodies

Wu, Baojun, Xu, Zhangyi, Knudson, Alicia, Carlson, Alexis, Chen, Naiyao, Kovaka, Sam, LaButti, Kurt, Lipzen, Anna, Pennachio, Christa, Riley, Robert, Schakwitz, Wendy, Umezawa, Kiwamu, Ohm, Robin A, G

Journal:

Genome Biology and Evolution

Year:

2018

Language:

english

File:

PDF, 6.33 MB

english, 2018

4

Comparison of genetic and cytogenetic maps of hexaploid wheat (Triticum aestivumL.) using SSR and DArT markers

Michael G. Francki, Esther Walker, Allison C. Crawford, Sue Broughton, Herbert W. Ohm, Iain Barclay, Robin E. Wilson, Robyn McLean

Journal:

Molecular Genetics and Genomics

Year:

2009

Language:

english

File:

PDF, 470 KB

english, 2009

5

An efficient gene deletion procedure for the mushroom-forming basidiomyceteSchizophyllum commune

Robin A. Ohm, Jan F. de Jong, Elsa Berends, Fengfeng Wang, Han A. B. Wösten, Luis G. Lugones

Journal:

World Journal of Microbiology and Biotechnology

Year:

2010

Language:

english

File:

PDF, 244 KB

english, 2010

6

The effect of genetic variation in the type 1 deiodinase gene on the interindividual variation in serum thyroid hormone levels: an investigation in healthy Danish twins

Wendy M. Van Der Deure, Pia Skov Hansen, Robin P. Peeters, André G. Uitterlinden, Mogens Fenger, Kirsten Ohm Kyvik, Laszlo Hegedüs, Theo J. Visser

Journal:

Clinical Endocrinology

Year:

2009

Language:

english

File:

PDF, 217 KB

english, 2009

7

Transcription factor genes of Schizophyllum commune involved in regulation of mushroom formation

Robin A. Ohm, Jan F. de Jong, Charissa de Bekker, Han A. B. Wösten, Luis G. Lugones

Journal:

Molecular Microbiology

Year:

2011

Language:

english

File:

PDF, 783 KB

english, 2011

8

Heterogenic expression of genes encoding secreted proteins at the periphery of Aspergillus niger colonies

Arman Vinck, Charissa de Bekker, Adam Ossin, Robin A. Ohm, Ronald P. de Vries, Han A. B. Wösten

Journal:

Environmental Microbiology

Year:

2011

Language:

english

File:

PDF, 807 KB

english, 2011

9

Genome sequence of the model mushroom Schizophyllum commune

Ohm, Robin A, de Jong, Jan F, Lugones, Luis G, Aerts, Andrea, Kothe, Erika, Stajich, Jason E, de Vries, Ronald P, Record, Eric, Levasseur, Anthony, Baker, Scott E

Journal:

Nature Biotechnology

Year:

2010

Language:

english

File:

PDF, 997 KB

english, 2010

10

The blue light receptor complex WC-1/2 of Schizophyllum commune is involved in mushroom formation and protection against phototoxicity

Robin A. Ohm, David Aerts, Han A. B. Wösten, Luis G. Lugones

Journal:

Environmental Microbiology

Year:

2012

Language:

english

File:

PDF, 1.39 MB

english, 2012

11

Fungal-specific transcription factor AbPf2 activates pathogenicity in Alternaria brassicicola

Cho, Yangrae, Ohm, Robin A., Grigoriev, Igor V., Srivastava, Akhil

Journal:

The Plant Journal

Year:

2013

Language:

english

File:

PDF, 1.41 MB

english, 2013

12

Prevalence of transcription factors in ascomycete and basidiomycete fungi

Todd, Richard B, Zhou, Miaomiao, Ohm, Robin A, Leeggangers, Hendrika ACF, Visser, Loek, de Vries, Ronald P

Journal:

Year:

2014

Language:

english

File:

PDF, 1.37 MB

english, 2014

13

Genome sequencing provides insight into the reproductive biology, nutritional mode and ploidy of the fern pathogen Mixia osmundae

Toome, Merje, Ohm, Robin A., Riley, Robert W., James, Timothy Y., Lazarus, Katherine L., Henrissat, Bernard, Albu, Sebastian, Boyd, Alexander, Chow, Julianna, Clum, Alicia, Heller, Gregory, Lipzen, An

Journal:

New Phytologist

Year:

2014

Language:

english

File:

PDF, 474 KB

english, 2014

14

Latent homology and convergent regulatory evolution underlies the repeated emergence of yeasts

Nagy, László G., Ohm, Robin A., Kovács, Gábor M., Floudas, Dimitrios, Riley, Robert, Gácser, Attila, Sipiczki, Mátyás, Davis, John M., Doty, Sharon L., de Hoog, G Sybren, Lang, B. Franz, Spatafora, Jo

Journal:

Nature Communications

Year:

2014

Language:

english

File:

PDF, 320 KB

english, 2014

15

Identification and Consequences of Polymorphisms in the Thyroid Hormone Receptor Alpha and Beta Genes

Sørensen, Helena Gásdal, van der Deure, Wendy M., Hansen, Pia Skov, Peeters, Robin P., Breteler, Monique M.B., Kyvik, Kirsten Ohm, Sørensen, Thorkild I.A., Hegedüs, Laszlo, Visser, Theo J.

Journal:

Year:

2008

Language:

english

File:

PDF, 156 KB

english, 2008

16

Comparative Genome Structure, Secondary Metabolite, and Effector Coding Capacity across Cochliobolus Pathogens

Condon, Bradford J., Leng, Yueqiang, Wu, Dongliang, Bushley, Kathryn E., Ohm, Robin A., Otillar, Robert, Martin, Joel, Schackwitz, Wendy, Grimwood, Jane, MohdZainudin, NurAinIzzati, Xue, Chunsheng, Wa

Journal:

Year:

2013

Language:

english

File:

PDF, 3.59 MB

english, 2013

17

Transcription Factor Amr1 Induces Melanin Biosynthesis and Suppresses Virulence in Alternaria brassicicola

Cho, Yangrae, Srivastava, Akhil, Ohm, Robin A., Lawrence, Christopher B., Wang, Koon-Hui, Grigoriev, Igor V., Marahatta, Sharadchandra P., Xu, Jin-Rong

Journal:

Year:

2012

Language:

english

File:

PDF, 1.13 MB

english, 2012

18

Diverse Lifestyles and Strategies of Plant Pathogenesis Encoded in the Genomes of Eighteen Dothideomycetes Fungi

Ohm, Robin A., Feau, Nicolas, Henrissat, Bernard, Schoch, Conrad L., Horwitz, Benjamin A., Barry, Kerrie W., Condon, Bradford J., Copeland, Alex C., Dhillon, Braham, Glaser, Fabian, Hesse, Cedar N., K

Journal:

Year:

2012

Language:

english

File:

PDF, 1.25 MB

english, 2012

19

Genomics and Transcriptomics Analyses of the Oil-Accumulating Basidiomycete Yeast Trichosporon oleaginosus : Insights into Substrate Utilization and Alternative Evolutionary Trajectories of Fungal Mating Systems

Kourist, Robert, Bracharz, Felix, Lorenzen, Jan, Kracht, Octavia N., Chovatia, Mansi, Daum, Chris, Deshpande, Shweta, Lipzen, Anna, Nolan, Matt, Ohm, Robin A., Grigoriev, Igor V., Sun, Sheng, Heitman,

Journal:

Year:

2015

Language:

english

File:

PDF, 2.30 MB

english, 2015

20

Gene expression during zombie ant biting behavior reflects the complexity underlying fungal parasitic behavioral manipulation

de Bekker, Charissa, Ohm, Robin A., Loreto, Raquel G., Sebastian, Aswathy, Albert, Istvan, Merrow, Martha, Brachmann, Andreas, Hughes, David P.

Journal:

Year:

2015

Language:

english

File:

PDF, 1.19 MB

english, 2015

21

Thyroid Hormone Transport and Metabolism by Organic Anion Transporter 1C1 and Consequences of Genetic Variation

van der Deure, Wendy M., Hansen, Pia Skov, Peeters, Robin P., Kyvik, Kirsten Ohm, Friesema, Edith C. H., Hegedüs, Laszlo, Visser, Theo J.

Journal:

Year:

2008

File:

PDF, 289 KB

2008

22

Thyroid Hormone Transport and Metabolism by Organic Anion Transporter 1C1 and Consequences of Genetic Variation

van der Deure, Wendy M., Hansen, Pia Skov, Peeters, Robin P., Kyvik, Kirsten Ohm, Friesema, Edith C. H., Hegedüs, Laszlo, Visser, Theo J.

Journal:

Year:

2008

Language:

english

File:

PDF, 289 KB

english, 2008

23

Entomotoxic and nematotoxic lectins and protease inhibitors from fungal fruiting bodies

Sabotič, Jerica, Ohm, Robin A., Künzler, Markus

Journal:

Applied Microbiology and Biotechnology

Year:

2016

Language:

english

File:

PDF, 2.84 MB

english, 2016

24

Genome sequencing of four Aureobasidium pullulans varieties: biotechnological potential, stress tolerance, and description of new species

Gostinčar, Cene, Ohm, Robin A, Kogej, Tina, Sonjak, Silva, Turk, Martina, Zajc, Janja, Zalar, Polona, Grube, Martin, Sun, Hui, Han, James, Sharma, Aditi, Chiniquy, Jennifer, Ngan, Chew, Lipzen, Anna,

Journal:

Year:

2014

Language:

english

File:

PDF, 3.59 MB

english, 2014

25

Draft Genome Sequence of the Animal and Human Pathogen Malassezia pachydermatis Strain CBS 1879

Triana, Sergio, González, Andrés, Ohm, Robin A., Wösten, Han A. B., de Cock, Hans, Restrepo, Silvia, Celis, Adriana

Journal:

Genome Announcements

Year:

2015

Language:

english

File:

PDF, 163 KB

english, 2015

26

Coprinopsis cinerea intracellular lactonases hydrolyze quorum sensing molecules of Gram-negative bacteria

Stöckli, Martina, Lin, Chia-wei, Sieber, Ramon, Plaza, David F., Ohm, Robin A., Künzler, Markus

Journal:

Fungal Genetics and Biology

Year:

2016

Language:

english

File:

PDF, 1.26 MB

english, 2016

27

Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum

Peter, Martina, Kohler, Annegret, Ohm, Robin A., Kuo, Alan, Krützmann, Jennifer, Morin, Emmanuelle, Arend, Matthias, Barry, Kerrie W., Binder, Manfred, Choi, Cindy, Clum, Alicia, Copeland, Alex, Grise

Journal:

Nature Communications

Year:

2016

Language:

english

File:

PDF, 1.32 MB

english, 2016

28

A Zinc-Finger-Family Transcription Factor, AbVf19 , Is Required for the Induction of a Gene Subset Important for Virulence in Alternaria brassicicola

Srivastava, Akhil, Ohm, Robin A., Oxiles, Lindsay, Brooks, Fred, Lawrence, Christopher B., Grigoriev, Igor V., Cho, Yangrae

Journal:

Molecular Plant-Microbe Interactions

Year:

2012

Language:

english

File:

PDF, 705 KB

english, 2012

29

Maturation of conidia on conidiophores of Aspergillus niger

Teertstra, Wieke R., Tegelaar, Martin, Dijksterhuis, Jan, Golovina, Elena A., Ohm, Robin A., Wösten, Han A.B.

Journal:

Fungal Genetics and Biology

Year:

2017

Language:

english

File:

PDF, 1.61 MB

english, 2017

30

The FlbA-regulated predicted transcription factor Fum21 of Aspergillus niger is involved in fumonisin production

Aerts, David, Hauer, Esther E., Ohm, Robin A., Arentshorst, Mark, Teertstra, Wieke R., Phippen, Christopher, Ram, Arthur F. J., Frisvad, Jens C., Wösten, Han A. B.

Journal:

Antonie van Leeuwenhoek

Year:

2017

Language:

english

File:

PDF, 1.28 MB

english, 2017

31

Ant-infecting Ophiocordyceps genomes reveal a high diversity of potential behavioral manipulation genes and a possible major role for enterotoxins

de Bekker, Charissa, Ohm, Robin A, Evans, Harry C., Brachmann, Andreas, Hughes, David P.

Journal:

Scientific Reports

Year:

2017

Language:

english

File:

PDF, 1.98 MB

english, 2017

32

The role of homeodomain transcription factors in fungal development

Vonk, Peter Jan, Ohm, Robin A.

Journal:

Fungal Biology Reviews

Year:

2018

Language:

english

File:

PDF, 2.01 MB

english, 2018

33

Transcriptional Responses of the Bdtf1-Deletion Mutant to the Phytoalexin Brassinin in the Necrotrophic Fungus Alternaria brassicicola

Cho, Yangrae, Ohm, Robin, Devappa, Rakshit, Lee, Hyang, Grigoriev, Igor, Kim, Bo, Ahn, Jong

Journal:

Year:

2014

Language:

english

File:

PDF, 1.14 MB

english, 2014

34

Lipid Metabolic Versatility in Malassezia spp. Yeasts Studied through Metabolic Modeling

Triana, Sergio, de Cock, Hans, Ohm, Robin A., Danies, Giovanna, Wösten, Han A. B., Restrepo, Silvia, González Barrios, Andrés F., Celis, Adriana

Journal:

Frontiers in Microbiology

Year:

2017

Language:

english

File:

PDF, 5.93 MB

english, 2017

35

Production of α-1,3-L-arabinofuranosidase active on substituted xylan does not improve compost degradation by Agaricus bisporus

Vos, Aurin M., Jurak, Edita, de Gijsel, Peter, Ohm, Robin A., Henrissat, Bernard, Lugones, Luis G., Kabel, Mirjam A., Wösten, Han A. B., Hildén, Kristiina

Journal:

Year:

2018

Language:

english

File:

PDF, 1.19 MB

english, 2018

36

Expression profile analysis reveals that Aspergillus fumigatus but not Aspergillus niger makes type II epithelial lung cells less immunological alert

Escobar, Natalia, Valdes, Ivan D., Keizer, Esther M., Ordonez, Soledad R., Ohm, Robin A., Wösten, Han A. B., de Cock, Hans

Journal:

Year:

2018

Language:

english

File:

PDF, 4.67 MB

english, 2018

37

Fungi Contribute Critical but Spatially Varying Roles in Nitrogen and Carbon Cycling in Acid Mine Drainage

Mosier, Annika C., Miller, Christopher S., Frischkorn, Kyle R., Ohm, Robin A., Li, Zhou, LaButti, Kurt, Lapidus, Alla, Lipzen, Anna, Chen, Cindy, Johnson, Jenifer, Lindquist, Erika A., Pan, Chongle, H

Journal:

Frontiers in Microbiology

Year:

2016

Language:

english

File:

PDF, 2.02 MB

english, 2016

38

The FlbA-regulated gene rpnR is involved in stress resistance and impacts protein secretion when Aspergillus niger is grown on xylose

Aerts, David, van den Bergh, Stijn G., Post, Harm, Altelaar, Maarten A.F., Arentshorst, Mark, Ram, Arthur F.J., Ohm, Robin A., Wösten, Han A. B.

Journal:

Applied and Environmental Microbiology

Year:

2018

Language:

english

File:

PDF, 1.35 MB

english, 2018

39

First evidence of cholinesterase-like activity in Basidiomycota

Sepčić, Kristina, Sabotič, Jerica, A. Ohm, Robin, Drobne, Damjana, Jemec Kokalj, Anita, Silman, Israel

Journal:

Year:

2019

Language:

english

File:

PDF, 1.65 MB

english, 2019

40

Genetic Underpinnings of Host Manipulation by Ophiocordyceps as Revealed by Comparative Transcriptomics

Will, Ian, Das, Biplabendu, Trinh, Thienthanh, Brachmann, Andreas, Ohm, Robin A., de Bekker, Charissa

Journal:

G3 Genes|Genome|Genetics

Year:

2020

File:

PDF, 1.92 MB

2020

41

Impact of maturation and growth temperature on cell-size distribution, heat-resistance, compatible solute composition and transcription profiles of Penicillium roqueforti conidia

Punt, Maarten, van den Brule, Tom, Teertstra, Wieke R., Dijksterhuis, Jan, den Besten, Heidy M.W., Ohm, Robin A., WÃ¶sten, Han A.B.

Journal:

Food Research International

Year:

2020

File:

PDF, 4.73 MB

2020

42

Degradative Capacity of Two Strains of Rhodonia placenta: From Phenotype to Genotype

KÃ¶lle, Martina, Horta, Maria Augusta Crivelente, Nowrousian, Minou, Ohm, Robin A., Benz, J. Philipp, PilgÃ¥rd, Annica

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 2.29 MB

2020

43

Telomere-to-telomere assembled and centromere annotated genomes of the two main subspecies of the button mushroom Agaricus bisporus reveal especially polymorphic chromosome ends

Sonnenberg, Anton S. M., Sedaghat-Telgerd, Narges, Lavrijssen, Brian, Ohm, Robin A., Hendrickx, Patrick M., Scholtmeijer, Karin, Baars, Johan J. P., van Peer, A.

Journal:

Scientific Reports

Year:

2020

File:

PDF, 2.61 MB

2020

44

Cycling in degradation of organic polymers and uptake of nutrients by a litterâdegrading fungus

Vos, Aurin M., Bleichrodt, RobertâJan, Herman, Koen C., Ohm, Robin A., Scholtmeijer, Karin, Schmitt, Heike, Lugones, Luis G., WÃ¶sten, Han A. B.

Journal:

Environmental Microbiology

Year:

2020

File:

PDF, 3.34 MB

2020